- Ifeffit - millenia.cars.aps.anl.gov

Re: [Ifeffit] xafs on wikipedia
by Bruce Ravel 07 Apr '06

07 Apr '06

On Friday 07 April 2006 14:04, you wrote: > Does it seem reasonable to you (and Bruce?) to use the 'CC > share-alike' license for all web / wiki content on xafs.org (and > perhaps the ifeffit wiki?), and make it clear to anyone posting that > what they post uses that license unless explicitly different? I think > we'd all agree on this, but it would be best to be clear. For the last couple years I have been using the CC Attribution-ShareAlike license for many things that I write. http://creativecommons.org/licenses/by-sa/2.5/ The attribution clause is consistent with how scientific attribution is typically done in the literature and the share-alike clause is consistent with how Matt and I license our codes. B -- Bruce Ravel ---------------------------------------------- bravel(a)anl.gov Molecular Environmental Science Group, Building 203, Room E-165 MRCAT, Sector 10, Advanced Photon Source, Building 433, Room B007 Argonne National Laboratory phone and voice mail: (1) 630 252 5033 Argonne IL 60439, USA fax: (1) 630 252 9793 My homepage: http://cars9.uchicago.edu/~ravel EXAFS software: http://cars9.uchicago.edu/~ravel/software/

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new release (061) of my codes
by Bruce Ravel 07 Apr '06

07 Apr '06

Hi folks, I just made a new release of Athena (0.8.049) and Artemis (0.8.006). A new source tarball is at SourceForge and at my website. An updater for Windows is on Matt's server. There is nothing big in this release, just some bug fixes and a few small usability improvements. See the release notes http://cars9.uchicago.edu/iffwiki/HoraeVersion061 for details. Enjoy, B -- Bruce Ravel ---------------------------------------------- bravel(a)anl.gov Molecular Environmental Science Group, Building 203, Room E-165 MRCAT, Sector 10, Advanced Photon Source, Building 433, Room B007 Argonne National Laboratory phone and voice mail: (1) 630 252 5033 Argonne IL 60439, USA fax: (1) 630 252 9793 My homepage: http://cars9.uchicago.edu/~ravel EXAFS software: http://cars9.uchicago.edu/~ravel/software/exafs/

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Ifeffit on 10.4
by Emmanuelle Montarges 06 Apr '06

06 Apr '06

Hi everyone Working on MacOs10.4 computer, after several unsuccessful installations of ifeffit package....I have the following message when I try to run Athena from the Terminal window. I downloaded Tk-804.027.tar and installed it in "temp" directory, but I still have the same message...have you ever had this error? ************ Can't load '/Library/Perl/5.8.6/darwin-thread-multi-2level/auto/Tk/Tk.bundle' for module Tk: dlopen(/Library/Perl/5.8.6/darwin-thread-multi-2level/auto/Tk/Tk.bundle, 1): Library not loaded: /usr/X11R6/lib/libX11.6.dylib Referenced from: /Library/Perl/5.8.6/darwin-thread-multi-2level/auto/Tk/Tk.bundle Reason: image not found at /System/Library/Perl/5.8.6/darwin-thread-multi-2level/DynaLoader.pm line 230. at /Applications/Ifeffit/bin/athena line 52 Compilation failed in require at /Applications/Ifeffit/bin/athena line 52. BEGIN failed--compilation aborted at /Applications/Ifeffit/bin/athena line 52. ********** thanks in advance for your help Emmanuelle MONTARGES-PELLETIER

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Re: latest version
by Bruce Ravel 06 Apr '06

06 Apr '06

On Tuesday 04 April 2006 11:09, you wrote: > Hi, Bruce, > > Could you please direct me to get the latest version of Athena and > Artemis? I am not sure if other windows users have the same > problem as I have but I don't think the download from Matt's webpage > been updated. And somehow the switch for the software to update > automatically in my computer was turned off and I can not get it turn > back on. Ning Download the most recent version of the installer then let the updater handle the chore of getting your computer up to date. Here are the details of how the updater works, including some troubleshooting tips: http://cars9.uchicago.edu/iffwiki/IfeffitOnWindows/WinUpdater If there are any other problems/questions -- ask on the mailing list. HTH, B -- Bruce Ravel ---------------------------------------------- bravel(a)anl.gov Molecular Environmental Science Group, Building 203, Room E-165 MRCAT, Sector 10, Advanced Photon Source, Building 433, Room B007 Argonne National Laboratory phone and voice mail: (1) 630 252 5033 Argonne IL 60439, USA fax: (1) 630 252 9793 My homepage: http://cars9.uchicago.edu/~ravel EXAFS software: http://cars9.uchicago.edu/~ravel/software/

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tungsten spectra
by Renato Canha Ambrosio 06 Apr '06

06 Apr '06

Dear colleagues, I woulk like to know if anyone ha the XANES spectra at LI, II and III from a W foil obtained at a conventional XAFS beamline. I need it in order to calibrate DXAS data. Thank you very much Renato Canha rcanha(a)ccet.ufrn.br -- Open WebMail Project (http://openwebmail.org) ---------- Original Message ----------- From: ifeffit-request(a)millenia.cars.aps.anl.gov To: ifeffit(a)millenia.cars.aps.anl.gov Sent: Sun, 2 Apr 2006 12:00:11 -0500 Subject: Ifeffit Digest, Vol 38, Issue 2 > Send Ifeffit mailing list submissions to > ifeffit(a)millenia.cars.aps.anl.gov > > To subscribe or unsubscribe via the World Wide Web, visit > http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit > or, via email, send a message with subject or body 'help' to > ifeffit-request(a)millenia.cars.aps.anl.gov > > You can reach the person managing the list at > ifeffit-owner(a)millenia.cars.aps.anl.gov > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of Ifeffit digest..." > > Today's Topics: > > 1. xafs on wikipedia (Francesco Giannici) > 2. Re: xafs on wikipedia (Stefano Ciurli) > 3. Re: xafs on wikipedia (Carlo Segre) > > ---------------------------------------------------------------------- > > Message: 1 > Date: Sun, 2 Apr 2006 09:00:56 +0200 > From: "Francesco Giannici" <zenarcade(a)libero.it> > Subject: [Ifeffit] xafs on wikipedia > To: "ifeffit" <ifeffit(a)millenia.cars.aps.anl.gov> > Message-ID: <IX325K$B150A1BE546B51869BD525DBC482B4F4(a)libero.it> > Content-Type: text/plain; charset=iso-8859-1 > > Hi all. > I'd like to let you know that the Italian version of Wikipedia now > contains an article on X-ray absorption, at > http://it.wikipedia.org/wiki/EXAFS . > (Wikipedia is a free encyclopedia that anyone can edit). I used some > images by Bruce, who asked me to make this announcement. Although > the article is written in Italian, maybe it could motivate the > readers of this list to do the same on their local wikipedia. > > Bye > -- > Francesco Giannici > Dept. of Inorganic Chemistry > University of Palermo > giannici at pa dot ismn dot cnr dot it > > ------------------------------ > > Message: 2 > Date: Sun, 2 Apr 2006 10:32:24 +0200 > From: Stefano Ciurli <stefano.ciurli(a)unibo.it> > Subject: Re: [Ifeffit] xafs on wikipedia > To: XAFS Analysis using Ifeffit <ifeffit(a)millenia.cars.aps.anl.gov> > Message-ID: <a06230903c0553c88e83b(a)[192.168.1.3]> > Content-Type: text/plain; charset="us-ascii" ; format="flowed" > > Dear Francesco, > very well done! Thanks! > Stefano > -- > ____________________________________________ > > Stefano Ciurli > Professor of Chemistry > Laboratory of Bioinorganic Chemistry > Department of Agro-Environmental Science and Technology > University of Bologna > Viale Giuseppe Fanin, 40 > I-40127 Bologna > Italy > Phone: +39-051-209-6204 > Fax: +39-051-209-6203 > > "Fatti non foste a viver come bruti, > ma per seguir virtute e canoscenza" > Dante Alighieri - Inferno - Canto XXVI > > "Ihr seid bestimmt, nicht Tieren gleich zu leben, > Nein, Tugend zu erringen und Erkenntnis" > "Ye were not form'd to live the life of brutes, > But virtue to pursue and knowledge high" > > ------------------------------ > > Message: 3 > Date: Sun, 2 Apr 2006 10:39:50 -0500 (CDT) > From: Carlo Segre <segre(a)iit.edu> > Subject: Re: [Ifeffit] xafs on wikipedia > To: XAFS Analysis using Ifeffit <ifeffit(a)millenia.cars.aps.anl.gov> > Message-ID: <Pine.LNX.4.64.0604021039290.4587(a)localhost.localdomain> > Content-Type: text/plain; charset=us-ascii; format=flowed > > Dear Francesco: > > Excellent! > > Carlo > > On Sun, 2 Apr 2006, Francesco Giannici wrote: > > > Hi all. I'd like to let you know that the Italian version of Wikipedia > > now contains an article on X-ray absorption, at > > http://it.wikipedia.org/wiki/EXAFS . (Wikipedia is a free encyclopedia > > that anyone can edit). I used some images by Bruce, who asked me to make > > this announcement. Although the article is written in Italian, maybe it > > could motivate the readers of this list to do the same on their local > > wikipedia. > > > > Bye > > > > -- > Carlo U. Segre -- Professor of Physics > Associate Dean for Special Projects, Graduate College > Illinois Institute of Technology > Voice: 312.567.3498 Fax: 312.567.3494 > Carlo.Segre(a)iit.edu http://www.iit.edu/~segre > > ------------------------------ > > _______________________________________________ > Ifeffit mailing list > Ifeffit(a)millenia.cars.aps.anl.gov > http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit > > End of Ifeffit Digest, Vol 38, Issue 2 > ************************************** ------- End of Original Message -------

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Re: latest version
by Bruce Ravel 05 Apr '06

05 Apr '06

On Tuesday 04 April 2006 11:09, you wrote: > Hi, Bruce, > > Could you please direct me to get the latest version of Athena and > Artemis? I am not sure if other windows users have the same > problem as I have but I don't think the download from Matt's webpage > been updated. And somehow the switch for the software to update > automatically in my computer was turned off and I can not get it turn > back on. Ning Download the most recent version of the installer then let the updater handle the chore of getting your computer up to date. Here are the details of how the updater works, including some troubleshooting tips: http://cars9.uchicago.edu/iffwiki/IfeffitOnWindows/WinUpdater If there are any other problems/questions -- ask on the mailing list. HTH, B -- Bruce Ravel ---------------------------------------------- bravel(a)anl.gov Molecular Environmental Science Group, Building 203, Room E-165 MRCAT, Sector 10, Advanced Photon Source, Building 433, Room B007 Argonne National Laboratory phone and voice mail: (1) 630 252 5033 Argonne IL 60439, USA fax: (1) 630 252 9793 My homepage: http://cars9.uchicago.edu/~ravel EXAFS software: http://cars9.uchicago.edu/~ravel/software/

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xafs on wikipedia
by Francesco Giannici 02 Apr '06

02 Apr '06

Hi all. I'd like to let you know that the Italian version of Wikipedia now contains an article on X-ray absorption, at http://it.wikipedia.org/wiki/EXAFS . (Wikipedia is a free encyclopedia that anyone can edit). I used some images by Bruce, who asked me to make this announcement. Although the article is written in Italian, maybe it could motivate the readers of this list to do the same on their local wikipedia. Bye -- Francesco Giannici Dept. of Inorganic Chemistry University of Palermo giannici at pa dot ismn dot cnr dot it

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Re: [Ifeffit] new release (061) of my codes
by Matt Newville 31 Mar '06

31 Mar '06

Stefano, I'm very confused. Please help me understand what does and does not work for you. Today you said: > 2) If I just type 'ifeffit' from the command line I get the following: > > > stefano% ifeffit > > dyld: Library not loaded: /usr/local/lib/libpgplot.dylib > Referenced from: /Applications/Ifeffit/bin/ifeffit > Reason: image not found > > Trace/BPT trap > Emmanuelle seems to have similar behavior. Of course, you know that this means that no ifeffit applications will run correctly. The messages you sent yesterday implied very strange permission problems and was definitely different than this. What changed? Has the ifeffit command-line program EVER worked for you? Really, I hope this question illustrates my confusion about what does and does not work for you. But you also said today: > just to let people know that for me (OSX 10.4.5) Athena works fine > after installation from ifeffit-1.2.8-Mac10.4.1_pkg.dmg OK... so Ifeffit and athena work??? That is very confusing. It also seems to be very different from Emmanuelle's experience. Hmmm. Then again, if Ifeffit and athena do work, what is the problem you're having? --Matt

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Re: [Ifeffit] new release (061) of my codes
by Matt Newville 31 Mar '06

31 Mar '06

Stefano, I don't know why 'ifeffit i' reports a blank during perl's configuration. Can you verify these from a terminal: A. what does ~> /Applications/Ifeffit/bin/ifeffit -i report? B. Start the command-line ifeffit and type ifeffit> print $&install_dir what does this say? Then again, I don't understand why horae needs to do 'ifeffit -i' on a Mac. It will always be /Applications/Ifeffit/share/ifeffit. --Matt

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Re: [Ifeffit] new release (061) of my codes
by Matt Newville 30 Mar '06

30 Mar '06

HI Stefano, > stefano% ~> /Applications/Ifeffit/bin/ifeffit -i > tcsh: /Users/stefano: Permission denied. But that's implying that you can't even run ifeffit due to permission problems. That makes it seem much more about your system than about Ifeffit. > stefano# ifeffit > stefano# ifeffit> print $&install_dir Hmm, that's weird. The banner message didn't print and the prompt is wrong (it should be "Ifeffit>"). Any ideas why that might be? > stefano# ifeffit> print $&install_dir > su: Illegal variable name. > stefano# print $&install_dir > su: Illegal variable name. Hmm, that's weird too. I'm not sure what wrote "su: Illegal variable name." I'm pretty sure that is not from the ifeffit program. --Matt

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