[Ifeffit] error in ATOMS
Julius Campecino
jcampecino at gmail.com
Thu Dec 12 09:55:43 CST 2013
Yep! I would like to thank everyone who extended their help. And hopefully
soon feff8 (if this offers more sophistication than feff6) will be
incorporated to ATOMS :) Thank you, Bruce.
Julius
On Thu, Dec 12, 2013 at 7:46 AM, Bruce Ravel <bravel at bnl.gov> wrote:
>
> Hi Julius,
>
> Your original email from last month came while I was on travel.
> Happily someone else helped you get over the immediate problem, so
> this issue has been languishing on my back burner. I finally got
> around to looking at it this morning.
>
> The next release of the software will fix both of the problems you
> observed:
>
> 1. The "add a site" button was broken and should work in the next
> release.
>
> 2. The problem you had with your original crystal data will still
> happen. Robert's solution was the correct one. In the next
> release, a situation like yours will fail more gracefully and
> Artemis will issue a (hopefully) useful error message.
>
> Thanks for reporting your problems to the mailing list. It really
> helps make the software better.
>
> I should also point out what an excellent advertisement for the
> mailing list your original email was. I was out of the country and
> unavailable, so it's a good thing you didn't try to contact me
> directly. Because you used the mailing list, someone else was able to
> help you. That's a system t hat works!
>
> B
>
>
> On 11/13/2013 12:19 PM, Julius Campecino wrote:
>
>> Hi everyone,
>>
>> Did anyone figure out how to fix "Can't call method tag" error and
>> adding sites? Really a novice on fitting and I badly need help on this
>> to get going. Sorry to bother everyone.
>>
>> Thanks!
>>
>> Julius
>>
>>
>> On Mon, Nov 11, 2013 at 8:48 AM, Julius Campecino <jcampecino at gmail.com
>> <mailto:jcampecino at gmail.com>> wrote:
>>
>> Hi Chris,
>>
>> Yeah, I did try "add a site" but it is not responding. Does anyone
>> else experience this problem? Thank you, Chris.
>>
>> Julius
>>
>>
>> On Mon, Nov 11, 2013 at 9:51 AM, Christopher Patridge
>> <patridge at buffalo.edu <mailto:patridge at buffalo.edu>> wrote:
>>
>> Julius,
>>
>> While I am not certain what the error means, there is a button
>> displayed right above the atom list which says "ADD A SITE." I
>> would suggest that having a unit cell as large as you do, along
>> with rather weak scatterers such as N, C, O, and I assume H, it
>> is probably unnecessary to have sites beyond the 3rd shell or so
>> since these contribute negligibly to the EXAFS.
>>
>> Chris
>>
>> ********************************************
>> Dr. Christopher Patridge
>> Assistant Professor of Chemistry
>> Dept of Math and Natural Science
>> D'youville College
>> 320 Porter Ave., Buffalo, NY 14201
>> Phone: 716-829-8096 <tel:716-829-8096>
>> Email:_patridgc at dyc.edu <mailto:patridgc at dyc.edu>_
>>
>>
>>
>>
>> On Nov 10, 2013, at 1:26 PM, Julius Campecino
>> <jcampecino at gmail.com <mailto:jcampecino at gmail.com>> wrote:
>>
>> Hi Bruce,
>>>
>>> Here's the screen shot of my work in ATOMS. It's supposed to
>>> be more than 7 atoms in the core column but that's also one
>>> thing I do not know how to add change and add more atoms.
>>>
>>> When I click "Run Atoms", it gives me this error "Can't call
>>> method "tag" on an undefined value at
>>> C:/strawberry/perl/site/lib/Demeter/Atoms.pm line 668.'' I am
>>> using the recent version 0.9.18.2 of the Demeter installer.
>>>
>>> Thank you for your help!
>>>
>>> Julius
>>> <Atoms.png>_______________________________________________
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>>>
>>
>>
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>>
>>
>>
>>
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>>
>
> --
> Bruce Ravel ------------------------------------ bravel at bnl.gov
>
> National Institute of Standards and Technology
> Synchrotron Science Group at NSLS --- Beamlines U7A, X24A, X23A2
> Building 535A
> Upton NY, 11973
>
> Homepage: http://xafs.org/BruceRavel
> Software: https://github.com/bruceravel
>
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