Dear All, In Athena documentation section I can see data plotted as scatter instead of line type plot (for example the plot shown in the attached file). This feature seems to be helpful in deglitching the bad data points but I could not figure out how to do it! Can anybody guide me how to plot data as scatter in Athena? My platform is Windows8 x64. Thanks, /Shoaib
Hi Shoaib, Go to the preferences menu (I have version 0.9.21). Under the gnuplot section, there is a datastyle entry. You can select lines, points or linespoints. I don't see how to change symbol type or size though. cheers, -R. On 5/3/2015 2:02 AM, Shoaib Muhammad wrote:
Dear All,
In Athena documentation section I can see data plotted as scatter instead of line type plot (for example the plot shown in the attached file). This feature seems to be helpful in deglitching the bad data points but I could not figure out how to do it! Can anybody guide me how to plot data as scatter in Athena? My platform is Windows8 x64.
Thanks,
/Shoaib
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On 05/03/2015 03:02 AM, Shoaib Muhammad wrote:
Dear All,
In Athena documentation section I can see data plotted as scatter instead of line type plot (for example the plot shown in the attached file). This feature seems to be helpful in deglitching the bad data points but I could not figure out how to do it! Can anybody guide me how to plot data as scatter in Athena? My platform is Windows8 x64.
Robert's answer was correct, however it is the intent that plots made when using the deglitching tool are made with points rather than lines. Is that not the case on your computer? B -- Bruce Ravel ------------------------------------ bravel@bnl.gov National Institute of Standards and Technology Synchrotron Science Group at NSLS-II Building 535A Upton NY, 11973 Homepage: http://bruceravel.github.io/home/ Software: https://github.com/bruceravel Demeter: http://bruceravel.github.io/demeter/
Thanks Robert for this helpful tip. Actually plot don't change to scatter by itself when I select the "Deglitch and truncate data" from the drop down menu list. I have checked it on another PC with Win7x32 OS as well and the behavior is the same. As far I remember this behavior is the same in some of the previous versions of Athena as well at least on my Windows PC :) Regards, /Shoaib -----Original Message----- From: ifeffit-bounces@millenia.cars.aps.anl.gov [mailto:ifeffit-bounces@millenia.cars.aps.anl.gov] On Behalf Of Bruce Ravel Sent: Monday, May 4, 2015 1:04 AM To: XAFS Analysis using Ifeffit Subject: Re: [Ifeffit] Scatter Plot in Athena On 05/03/2015 03:02 AM, Shoaib Muhammad wrote:
Dear All,
In Athena documentation section I can see data plotted as scatter instead of line type plot (for example the plot shown in the attached file). This feature seems to be helpful in deglitching the bad data points but I could not figure out how to do it! Can anybody guide me how to plot data as scatter in Athena? My platform is Windows8 x64.
Robert's answer was correct, however it is the intent that plots made when using the deglitching tool are made with points rather than lines. Is that not the case on your computer? B -- Bruce Ravel ------------------------------------ bravel@bnl.gov National Institute of Standards and Technology Synchrotron Science Group at NSLS-II Building 535A Upton NY, 11973 Homepage: http://bruceravel.github.io/home/ Software: https://github.com/bruceravel Demeter: http://bruceravel.github.io/demeter/ _______________________________________________ Ifeffit mailing list Ifeffit@millenia.cars.aps.anl.gov http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
On 05/03/2015 09:18 PM, Shoaib Muhammad wrote:
Actually plot don't change to scatter by itself when I select the "Deglitch and truncate data" from the drop down menu list. I have checked it on another PC with Win7x32 OS as well and the behavior is the same. As far I remember this behavior is the same in some of the previous versions of Athena as well at least on my Windows PC:)
You are absolutely right. I'm not sure why I thought otherwise. Guess I haven't deglitched any data recently.... B -- Bruce Ravel ------------------------------------ bravel@bnl.gov National Institute of Standards and Technology Synchrotron Science Group at NSLS-II Building 535A Upton NY, 11973 Homepage: http://bruceravel.github.io/home/ Software: https://github.com/bruceravel Demeter: http://bruceravel.github.io/demeter/
On 05/04/2015 09:03 AM, Bruce Ravel wrote:
On 05/03/2015 09:18 PM, Shoaib Muhammad wrote:
Actually plot don't change to scatter by itself when I select the "Deglitch and truncate data" from the drop down menu list. I have checked it on another PC with Win7x32 OS as well and the behavior is the same. As far I remember this behavior is the same in some of the previous versions of Athena as well at least on my Windows PC:)
You are absolutely right. I'm not sure why I thought otherwise. Guess I haven't deglitched any data recently....
I am about to push a fix to github that plots the data while deglitching using points rather than lines. That was my intent, but that's not what the code actually did. This fix will be included the next time I build a Windows installer. Thanks for pointing this out. As always, useful bug reports like this are the main reason that Demeter does not suck a whole more! I am always grateful for useful bug reports. Cheers, B -- Bruce Ravel ------------------------------------ bravel@bnl.gov National Institute of Standards and Technology Synchrotron Science Group at NSLS-II Building 535A Upton NY, 11973 Homepage: http://bruceravel.github.io/home/ Software: https://github.com/bruceravel Demeter: http://bruceravel.github.io/demeter/
participants (3)
-
Bruce Ravel -
Robert Gordon -
Shoaib Muhammad