Hi folks, I'm using a PM (2X1.8 MHz processors) under OSX v 10.3.4 (Panther latest version). I have installed ifeffit-1.2.5a two weeks ago and used Atoms many times since. It works well till yesterday when I loose the ability to use the space group browser with an error reported on the herre attached file. It looks that I have a problem with Tk, but I don't understand why. I have tried to make a new install from scratch after putting in the trash the ifeffit and perl (the one I assume to be put by the iffit installer in the home/lib folder): it didn't fix the problem. I found rather puzzling to find several perl folders (one coming from ifeffit and one from Fink). Looking my environnement, I found the following: PERL5LIB=/sw/lib/perl5:/sw/lib/perl5/darwin. I therefore modify my profile making a setenv to force to use the perl from ifeffit without any change. So it seems some hidden file is responsible of this behavior. I must say that if I enter the space group by hand, Atoms runs (e.g. it creates the feff.inp file). If anybody has a solution, I will appreciate. Additional point: I have compliled feff7 using the GNU g77 from Fink, but it stops the run with a segmentation fault. Any hint? Best regards Michel -- __________________________________________ Michel Jaouen Universite de Poitiers - UFR Sciences - SP2MI LMP UMR 6630-CNRS Boulevard Pierre et Marie Curie - Teleport 2 BP 30179 86962 Futuroscope - Chasseneuil Cedex France Tel : (33) 5 49 49 67 37 Fax : (33) 5 49 49 66 92 e-mail : Michel.Jaouen@univ-poitiers.fr __________________________________________
The default memory limit of the (cshell at least) is insufficient to run feff. Try rerunning the code after using the (cshell) command unlimit. You can check the current shell limitations with "limit -h" (hard limits). I don't know what the equivalent commands for bash are but I am fairly sure there are similar limitations (to prevent naive users from using all system resources by accident). Paul On Jun 3, 2004, at 6:50 PM, Michel Jaouen wrote:
Hi folks,
I'm using a PM (2X1.8 MHz processors) under OSX v 10.3.4 (Panther latest version). I have installed ifeffit-1.2.5a two weeks ago and used Atoms many times since. It works well till yesterday when I loose the ability to use the space group browser with an error reported on the herre attached file. It looks that I have a problem with Tk, but I don't understand why. I have tried to make a new install from scratch after putting in the trash the ifeffit and perl (the one I assume to be put by the iffit installer in the home/lib folder): it didn't fix the problem. I found rather puzzling to find several perl folders (one coming from ifeffit and one from Fink). Looking my environnement, I found the following: PERL5LIB=/sw/lib/perl5:/sw/lib/perl5/darwin. I therefore modify my profile making a setenv to force to use the perl from ifeffit without any change. So it seems some hidden file is responsible of this behavior. I must say that if I enter the space group by hand, Atoms runs (e.g. it creates the feff.inp file).
If anybody has a solution, I will appreciate.
Additional point: I have compliled feff7 using the GNU g77 from Fink, but it stops the run with a segmentation fault. Any hint?
Best regards
Michel -- __________________________________________
Michel Jaouen Universite de Poitiers - UFR Sciences - SP2MI LMP UMR 6630-CNRS Boulevard Pierre et Marie Curie - Teleport 2 BP 30179 86962 Futuroscope - Chasseneuil Cedex France Tel : (33) 5 49 49 67 37 Fax : (33) 5 49 49 66 92 e-mail : Michel.Jaouen@univ-poitiers.fr __________________________________________ _______________________________________________ Ifeffit mailing list Ifeffit@millenia.cars.aps.anl.gov http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
Dr. Paul Fons Senior Researcher National Institute for Advanced Industrial Science & Technology METI Center for Applied Near-Field Optics Research (CANFOR) AIST Central 4, Higashi 1-1-1 Tsukuba, Ibaraki JAPAN 305-8568 tel. +81-298-61-5636 fax. +81-298-61-2939 email: paul-fons@aist.go.jp The lines below are in a Japanese font 〒305−8568 茨城県つくば市東1−1−1 つくば中央第4 近接場光応用工学センター ポール・フォンス主任研究官
On Thursday 03 June 2004 08:37 pm, Paul Fons wrote: PF> The default memory limit of the (cshell at least) is insufficient to PF> run feff. Try rerunning the code after using the (cshell) command PF> unlimit. You can check the current shell limitations with "limit -h" PF> (hard limits). I don't know what the equivalent commands for bash are PF> but I am fairly sure there are similar limitations (to prevent naive PF> users from using all system resources by accident). In bash, the equivalent command is "ulimit". B -- Bruce Ravel ----------------------------------- ravel@phys.washington.edu Code 6134, Building 3, Room 405 Naval Research Laboratory phone: (1) 202 767 2268 Washington DC 20375, USA fax: (1) 202 767 4642 NRL Synchrotron Radiation Consortium (NRL-SRC) Beamlines X11a, X11b, X23b National Synchrotron Light Source Brookhaven National Laboratory, Upton, NY 11973 My homepage: http://feff.phys.washington.edu/~ravel EXAFS software: http://feff.phys.washington.edu/~ravel/software/exafs/
participants (3)
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Bruce Ravel
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Michel Jaouen
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Paul Fons