areaDetector Plugin NDPluginCircularBuff

March 9, 2015

Edmund Warrick, Diamond Light Source

Mark Rivers, University of Chicago

Contents

Overview

NDPluginCircularBuff is a triggering plugin. It receives NDArrays from a plugin or driver and checks whether a user-defined trigger condition has been met. The trigger condition is based on the values of up to two NDAttributes attached to the NDArray. The attribute values are used in a general calculation expression that defines the trigger condition. Once the trigger condition is detected the plugin outputs the triggering NDArray, along with a configurable number of pre- and post-trigger NDArrays. Triggering can also be performed using a soft trigger, controlled from the "Trigger" database record.

Acquisition is started by setting the "NDCircBuffControl" parameter to non-zero (via the "Capture" record in the associated database). The plugin then copies all received NDArrays to its ring buffer, wrapping once the specified pre-count is reached.

Once the trigger is detected, the plugin will immediately output all the NDArrays stored in the ring buffer in order from oldest to newest (by calling doCallbacksGenericPointer). After the trigger is set, new NDArrays will then be output as soon as they arrive, until the post-count is reached. The plugin will then stop buffering or outputting NDArrays until it is restarted via NDCircBuffControl. The plugin will also automatically restart if the following condition is true:

     (PresetTriggerCount == 0) || ((PresetTriggerCount > 0) && (ActualTriggerCount < PresetTriggerCount)))
    

NDPluginCircularBuff inherits from NDPluginDriver. The NDPluginCircularBuff class documentation describes this class in detail.

NDPluginCircularBuff defines the following parameters. It also implements all of the standard plugin parameters from NDPluginDriver . The EPICS database NDCircularBuff.template provides access to these parameters, listed in the following table.

Parameter Definitions in NDPluginCircularBuff.h and EPICS Record Definitions in NDCircularBuff.template
Parameter index variable asyn interface Access Description drvInfo string EPICS record name EPICS record type
NDCircBuffControl asynInt32 r/w Toggle triggering & buffering on/off CIRC_BUFF_CONTROL $(P)$(R)Capture
$(P)$(R)Capture_RBV
busy
bi
NDCircBuffStatus asynOctet r/o Plugin status feedback string CIRC_BUFF_STATUS $(P)$(R)StatusMessage stringin
NDCircBuffPreTrigger asynInt32 r/w Number of pre-trigger NDArrays to store CIRC_BUFF_PRE_TRIGGER $(P)$(R)PreCount
$(P)$(R)PreCount_RBV
longout
longin
NDCircBuffPostTrigger asynInt32 r/w Number of post-trigger NDArrays to output CIRC_BUFF_POST_TRIGGER $(P)$(R)PostCount
$(P)$(R)PostCount_RBV
longout
longin
NDCircBuffTriggerA asynOctet r/w Name of the NDAttribute for trigger A. CIRC_BUFF_TRIGGER_A $(P)$(R)TriggerA
$(P)$(R)TriggerA_RBV
stringout
stringin
NDCircBuffTriggerB asynOctet r/w Name of the NDAttribute for trigger B CIRC_BUFF_TRIGGER_B $(P)$(R)TriggerB
$(P)$(R)TriggerB_RBV
stringout
stringin
NDCircBuffTriggerAVal asynFloat64 r/o Value of the NDAttribute for trigger A. The attribute defined by TriggerA must have a numeric datatype, not string. This value field only updates when the plugin is capturing (Capture=1). CIRC_BUFF_TRIGGER_A_VAL $(P)$(R)TriggerAVal ai
NDCircBuffTriggerBVal asynFloat64 r/o Value of the NDAttribute for trigger B. The attribute defined by TriggerB must have a numeric datatype, not string. This value field only updates when the plugin is capturing (Capture=1). CIRC_BUFF_TRIGGER_B_VAL $(P)$(R)TriggerBVal ai
NDCircBuffTriggerCalc asynOctet r/w The calculation expression for the trigger. This can be any valid expression accepted by the EPICS calc routines in libCom, and used for example in the EPICS calc record. The maximum length of the expression is currently set to MAX_INFIX_SIZE (100) defined in postfix.h in EPICS base. CIRC_BUFF_TRIGGER_CALC $(P)$(R)TriggerCalc
$(P)$(R)TriggerCalc_RBV
waveform
waveform
NDCircBuffTriggerCalcVal asynFloat64 r/o Value of the calculated expression. This value field only updates when the plugin is capturing (Capture=1). CIRC_BUFF_TRIGGER_CALC_VAL $(P)$(R)TriggerCalcVal ai
NDCircBuffPresetTriggerCount asynInt32 r/w Controls how many times the plugin can be triggered before capture stops. The default is 1, so the plugin will only trigger once and then stop capturing. If this is 0 then the plugin will continue to retrigger forever until it is stopped by setting Capture=0. CIRC_BUFF_PRESET_TRIGGER_COUNT $(P)$(R)PresetTriggerCount
$(P)$(R)PresetTriggerCount_RBV
longout
longin
NDCircBuffActualTriggerCount asynInt32 r/o The number of triggers that have occurred since capture was last started. CIRC_BUFF_ACTUAL_TRIGGER_COUNT $(P)$(R)ActualTriggerCount_RBV longin
NDCircBuffCurrentImage asynInt32 r/o Number of NDArrays currently stored in ring buffer CIRC_BUFF_CURRENT_IMAGE $(P)$(R)CurrentQty_RBV longin
NDCircBuffPostCount asynInt32 r/o Number of post-trigger NDArrays emitted so far CIRC_BUFF_POST_COUNT $(P)$(R)PostTriggerQty_RBV longin
NDCircBuffSoftTrigger asynInt32 r/w Set to non-zero to force a trigger on next NDArray CIRC_BUFF_SOFT_TRIGGER $(P)$(R)Trigger busy
NDCircBuffTriggered asynInt32 r/o Current trigger status CIRC_BUFF_TRIGGERED $(P)$(R)Trigger_RBV bi
NDCircBuffFlushOnSoftTrig asynInt32 r/o Defines behaviour of the flush functionality. Choices are:
  • "OnNewImage" (0, default) Flushes on new image.
  • "Immediately" (1) Flushes immediately on software trigger.
CIRC_BUFF_FLUSH_ON_SOFTTRIGGER $(P)$(R)FlushOnSoftTrg
$(P)$(R)FlushOnSoftTrg_RBV
bo
bi

Triggering using NDArray attributes is quite powerful. Two NDArray attributes can be used for triggering. The names of these attributes are defined with the TriggerA and TriggerB records. The values of these attributes must be numeric, not string. The TriggerCalc record defines a calculation expression that uses that same syntax as the EPICS calc record. If the expression evaluates to a non-zero value then the plugin will be triggered. The variables in the expression are defined as follows:

The following are some example expressions. They assume that the NDPluginCircularBuff plugin is getting its data from the NDPluginStats plugin and that the NDPluginStats plugin is using an attributes XML file containing the following lines:

   <attribute name="MaxValue"  type="PARAM" source="MAX_VALUE"       datatype="DOUBLE" description="Maximum value" />
   <attribute name="CentroidX" type="PARAM" source="CENTROIDX_VALUE" datatype="DOUBLE" description="Centroid X position" />
  

Assume that TriggerA is set to MaxValue and TriggerB is set to CentroidX.

The following are examples of some expressions that can then be used for triggering:

Expression Description
A<200 Intensity of brightest pixel is less than 200
A>1.5*H && E>50;H:=A Intensity of brightest pixel (A) is more than 150% of the value in the previous image (H) and there are at least 50 images in the circular buffer. Set H to A after evaluation.
B<300 || A>100 X centroid is less than pixel 300 or the maximum intensity is greater than 100.

If the TriggerA or TriggerB attrbutes do not exist, or if they are non-numeric datatype then the TriggerAVal or TriggerBVal is set to NaN (Not a Number). If that value is used in the calculation expression then in some cases the TriggerCalcVal will also be NaN (for example A+B will be NaN). If TriggerCalcVal is NaN or Infinity then the expression is treated as 0 and the trigger will not occur. However, some expressions involving NaN arguments do not result in a NaN result and could result in false triggers. For example (A&&B) evaluates as 1 when both A and B are NaN. To avoid this problem the isnan() and isinf() functions can be used in the expression.

It is possible to continuously output individual NDArrays that match the trigger condition. To do this set PreCount=0, PostCount=1, and PresetTriggerCount=0.

Screen shots

The following is the MEDM screen that provides access to the parameters in NDPluginDriver.h and NDPluginCircularBuff.h through records in NDPluginBase.template and NDCircularBuff.template.

NDCircularBuff.adl

NDCircularBuff.png

Configuration

The NDPluginCircularBuff plugin is created with the NDCircularBuffConfigure command, either from C/C++ or from the EPICS IOC shell.

NDCircularBuffConfigure(const char *portName, int queueSize, int blockingCallbacks,
                        const char *NDArrayPort, int NDArrayAddr,
                        int maxBuffers, size_t maxMemory)
  

For details on the meaning of the parameters to this function refer to the detailed documentation on the NDCircularBuffConfigure function in the NDPluginCircularBuff.cpp documentation and in the documentation for the constructor for the NDPluginCircularBuff class.

In particular, note that maxBuffers constrains the size of the ring buffer - the plugin will discard any changes to the pre- or post count if this would result in (pre-count + post-count) exceeding maxBuffers.