[Ifeffit] trouble installing Demeter from source on Ubuntu 18.04
Ravel, Bruce
bravel at bnl.gov
Tue Oct 15 06:56:38 CDT 2019
I think that's actually an innocuous error. It is most likely a bug in
the test script rather than a bug in the code.
If you just carry on and install things, I suspect you will be fine.
B
On 10/14/19 7:21 AM, Joseph Zsombor-Pindera wrote:
> Dear mailing list members;
>
> I'm trying to build Demeter from source according to Bruce Ravel's guide
> (https://bruceravel.github.io/demeter/documents/SinglePage/installation.html
> <https://urldefense.proofpoint.com/v2/url?u=https-3A__bruceravel.github.io_demeter_documents_SinglePage_installation.html&d=DwMFaQ&c=aTOVZmpUfPKZuaG9NO7J7Mh6imZbfhL47t9CpZ-pCOw&r=mQnkrVIV2Z-eAGsJluRhYA&m=-MnkUeuguW6Zs_tyVSgsLZy5JlW26Q8D7037VPg5Mfk&s=Hvhk37BOS4-BMRpl7c9Y3Eu-RsVxUZ6AgHxXbqbi0Zs&e=>).
> I have mostly been able to install the dependencies, but I had trouble
> with the libwxgtk packages, so I installed 3.1.0 according to these
> instructions:
> https://gist.github.com/abdulhalim-cu/f3ae4be0b45baabef5623ccdd20ca584.
> wx-config --version results in: 3.1.0, so I think it's installed
> correctly. libgif4 is no longer in the repository, so I installed
> libgif-dev and libgif7. WxPerl 0.9932 is installed. Iffeffit is
> installed, and gnuplot-x11 and pgplot5 are installed. I ran ./Build
> installdeps and it ran but eventually got stuck in a loop saying "please
> tell me where I can find your apache src", which I ignored. The script
> terminated with "/usr/bin/make install -- OK" and then I installed
> apache2 anyways. Now, if I rerun it, it outputs "all prerequisites
> satisfied". I ran perl Build.PL, which seemed to complete successfully,
> and then finally ./Build and ./Build test, however ./Build test fails
> one test:
>
> Test Summary Report-------------------
> t/003_config.t (Wstat: 512 Tests: 22 Failed: 2)
> Failed tests: 17, 22
> Non-zero exit status: 2
> Files=44, Tests=2671, 89 wallclock secs ( 0.34 usr 0.07 sys + 85.03 cusr
> 3.94 csys = 89.38 CPU)
> Result: FAIL
> Failed 1/44 test programs. 2/2671 subtests failed.
>
> corresponding to:
>
> # Failed test 'configuration system introspection works: groups 38
> artemis'
> # at t/003_config.t line 66.
>
> # Failed test 'introspection after reading new group: groups'
> # at t/003_config.t line 80.
> # Looks like you failed 2 tests of 22.
> t/003_config.t .......... Dubious, test returned 2 (wstat 512, 0x200)
> Failed 2/22 subtests
>
> line 80 in demeter/t/003_config.t is:
> ok( ($#groups == $number_of_groups), 'introspection after reading new
> group: groups');
>
> I'm not sure what's going wrong here. Does anyone know how to resolve
> this problem?
>
> any help would be much appreciated,
> Joseph
>
> --
> *Joseph Zsombor-Pindera, BSc*
> PhD Student, UBC Chemistry
> Cell: 514.804.0798
> 6201 Cecil Green Park Road
> Vancouver BC, V6T 1Z1
>
> C
>
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--
Bruce Ravel ------------------------------------ bravel at bnl.gov
National Institute of Standards and Technology
Synchrotron Science Group at NSLS-II
Lead Beamline Scientist, 6BM (BMM)
Building 743, Room 114
Upton NY, 11973
Homepage: http://bruceravel.github.io/home/
Beamline: https://www.bnl.gov/ps/beamlines/beamline.php?r=6-BM
Software: https://github.com/bruceravel
Demeter: http://bruceravel.github.io/demeter/
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