[Ifeffit] Artemis crash on import

Thu Oct 13 16:27:10 CDT 2016

Hi Bruce,

Thanks for you quick reply. Yes I can run gnuplot and plot functions with
it. Also, I was able to open projects in Artemis with the previous version.
The issue only appeared after I updated Demeter.

Thanks,
George

On Thu, Oct 13, 2016 at 3:12 PM, Bruce Ravel <bravel at bnl.gov> wrote:

>
> That doesn't look like an artemis problem.  It looks like a Mac problem.
> Specifically it looks like gnuplot and or the windowing system is not
> working correctly.
>
> Can you run gnuplot all by itself?
>
> B
>
>
>
> On 10/13/2016 04:02 PM, George Sterbinsky wrote:
>
>> Hello,
>>
>> I am using Demeter on Mac OS X 10.11.6. I recently updated Demeter to
>> version 0.9.25 using the command "sudo port upgrade demeter". In
>> Artemis, choosing the menu item "open project or data" causes Artemis to
>> crash. I've pasted the information printed to the terminal below. This
>> includes everything printed to the terminal from the point at which
>> Artemis was started. Please let me know if any additional information
>> would help in resolving this issue.
>>
>> Thank you,
>> George
>>
>>
>> $ Artemis
>> 2016-10-13 14:51:18.097 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>>
>> gnuplot: unable to open display
>> '/private/tmp/com.apple.launchd.U9mQNzlNS1/org.macosforge.xquartz:0'
>> gnuplot: X11 aborted.
>> 2016-10-13 14:51:22.884 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:22.885 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:22.885 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:22.885 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:23.096 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:23.097 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:23.443 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:23.443 perl5.24[20180:991862] CFPasteboardRefgnuplot:
>> unable to open display '/private/tmp/com.apple.launch
>> d.U9mQNzlNS1/org.macosforge.xquartz:0'
>>
> gnuplot: X11 aborted.
>
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>>
>> global data
>> 2016-10-13 14:51:25.277 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:25.278 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:26.809 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:26.809 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:27.278 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:27.278 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:28.221 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:28.221 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:28.555 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:28.555 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:34.322 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:51:34.322 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:52:30.445 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:52:30.446 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:52:32.009 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:52:32.009 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:52:34.926 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:52:34.926 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:52:35.148 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:52:35.148 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:52:38.016 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> 2016-10-13 14:52:38.017 perl5.24[20180:991862] CFPasteboardRef
>> CFPasteboardCreate(CFAllocatorRef, CFStringRef) : failed to create
>> global data
>> Oct 13 14:52:38  perl5.24[20180] <Warning>: Window Server is not
>> available.
>> Oct 13 14:52:38  perl5.24[20180] <Warning>: Window Server is not
>> available.
>> Segmentation fault: 11
>>
>>
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>>
>
> --
>  Bruce Ravel  ------------------------------------ bravel at bnl.gov
>
>  National Institute of Standards and Technology
>  Synchrotron Science Group at NSLS-II
>  Building 743, Room 114
>  Upton NY, 11973
>
>  Homepage:    http://bruceravel.github.io/home/
>  Software:    https://github.com/bruceravel
>  Demeter:     http://bruceravel.github.io/demeter/
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