[Ifeffit] problems installing athena et al under ubuntu 16.04 LTS

[Juan de la figuera]

Hi to all,

I found that there is actually an "horae" package in ubuntu. It is a bit
old (0.8.061 for athena) but it takes care of all the installing. Ifeffit
is also packaged, both by Carlo Segre <segre at debian.org>.

Juan

El mié., 23 nov. 2016 a las 21:56, Juan de la figuera (<
juan.delafiguera at gmail.com>) escribió:

> BTW, it does not seem to be a problem with locale, I set it to "C"
> beforehand:
>
> juan at maghemite:xraylarch$ locale
> LANG=C
> LANGUAGE=C
> LC_CTYPE="C"
> LC_NUMERIC="C"
> LC_TIME="C"
> LC_COLLATE="C"
> LC_MONETARY="C"
> LC_MESSAGES="C"
> LC_PAPER="C"
> LC_NAME="C"
> LC_ADDRESS="C"
> LC_TELEPHONE="C"
> LC_MEASUREMENT="C"
> LC_IDENTIFICATION="C"
> LC_ALL=C
>
>
> El mié., 23 nov. 2016 a las 19:43, Juan de la figuera (<
> juan.delafiguera at gmail.com>) escribió:
>
> Dear all,
>
> I have been installing demeter from git under ubuntu 16.04 LTS, following
> the non-root instructions from:
> https://gist.github.com/waveform80/3959252
>
> I also installed xraylarch from git. Xaylarch is only missing:
> #=== Warning: Some recommended Python Packages are missing:
>     epics:  needed for using the EPICS control system
>     pyFAI:  needed for xrd modules
>
> It seems to work, but when I try to open a file that can be open properly
> from Athena installed on Windows, I get:
>
> Trying Larch server:
> /home/juan/perl5/lib/perl5/x86_64-linux-gnu-thread-multi/Demeter/share/ini/larch_server.ini
>
> Trying Larch server:  larch_server -p 4968 start
> larch_server port=4968: started
>
> gnuplot> set xrange [ 6900130000 : 7955610000 ]
>                      ^
>         line 0: warning: integer overflow; changing to floating point
>
> gnuplot> set xrange [ 6900130000 : 7955610000 ]
>                                   ^
>         line 0: warning: integer overflow; changing to floating point
>
>
> and although it opens the data in a gnuplot window, the scale is off
> (7x10^9 instead of 7x10^3). I am assuming once it is confused about the
> scale, it makes a mess with the data.
> The output of probe -bv is:
> t/000_ifeffit.t .........
> 1..6
> ok 1 - show
> ok 2 - show arrays:
> ok 3 - get_scalar 1.2345
> ok 4 - put scalar
> ok 5 - put/get_string: my.xmu
> ok 6 - put/get_array:
> ok
> t/001_base.t ............
> 1..24
> Trying Larch server:
> /home/juan/soft/demeter/blib/lib/Demeter/share/ini/larch_server.ini
> Trying Larch server:  larch_server -p 4969 start
> larch_server port=4969: started
> ok 1 - new() works
> ok 2 - group is set: orihs
> ok 3 - unique group names: orihs & bcxkm
> ok 4 - installation location identified
> ok 5 - identity string
> ok 6 - generic object is not plottable
> ok 7 - generic object has no data
> ok 8 - Project role works
> ok 9 - demeter can do introspection
> ok 10 - ifeffit disposal mode flag: 1
> ok 11 - handle unknown mode gracefully
> ok 12 - other disposal modes all false
> ok 13 - turn on screen disposal mode flag
> ok 14 - turn on file disposal mode flag
> ok 15 - turn on buffer disposal mode flag
> ok 16 - unknown window not recognized
> ok 17 - known element (Cu) is recognized
> ok 18 - unknown element (Ci) not recognized
> ok 19 - simple template works
> not ok 20 - simple disposal to Ifeffit: string
>
> #   Failed test 'simple disposal to Ifeffit: string'
> #   at t/001_base.t line 69.
> not ok 21 - simple disposal to Ifeffit: scalar
>
> #   Failed test 'simple disposal to Ifeffit: scalar'
> #   at t/001_base.t line 70.
> Use of uninitialized value in numeric eq (==) at t/001_base.t line 71.
> not ok 22 - simple disposal to Ifeffit: array
>
> #   Failed test 'simple disposal to Ifeffit: array'
> #   at t/001_base.t line 71.
> ok 23 - simple disposal wrapper works
> ok 24 - plot_with works
> # Looks like you failed 3 tests of 24.
>
> Any help would be appreciated.
>
>
> Juan
>
>
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