[Ifeffit] Macports ifeffit and Demeter Update

[Jennifer Carter]

Frank,

This is what I get for the following terminal inputs:

*169-231-92-234:~ jwc137$ port installed ifeffit p5.16-ifeffit
demeter-devel*

The following ports are currently installed:

  demeter-devel @0.9.20pre10_0

  demeter-devel @0.9.20-2014-06-06_0

  ifeffit @1.2.11c_0+gcc48

  ifeffit @1.2.13_0+gcc48 (active)

  p5.16-ifeffit @1.0.0_0

  p5.16-ifeffit @2_0 (active)

*169-231-92-234:~ jwc137$ ls -l /opt/local/bin/athena*

ls: /opt/local/bin/athena: No such file or directory

*169-231-92-234:~ jwc137$ ls -l /opt/local/bin/atoms*

ls: /opt/local/bin/atoms: No such file or directory

169-231-92-234:~ jwc137$
ᐧ

~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Jennifer L.W. Carter

Assistant Professor
Department of Materials Science and Engineering
Case Western Reserve University

*500B White Building*



*10900 Euclid Ave.Cleveland, OH 44106-4901phone: (216)
368-4214email: jennifer.w.carter at case.edu <jennifer.w.carter at case.edu>*


On Mon, Jul 14, 2014 at 2:00 PM, Schima, Frank <frank.schima at nist.gov>
wrote:

>  Jennifer,
>
>
>  There is nothing else to do.
>
>  What is the output of the following 3 commands?
>
>  port installed ifeffit p5.16-ifeffit demeter-devel
> ls -l /opt/local/bin/athena
> ls -l /opt/local/bin/atoms
>
>  Here is the my output (on 2 different computers):
>
>  $ port installed ifeffit p5.16-ifeffit demeter-devel
> The following ports are currently installed:
>   demeter-devel @0.9.20pre10_0 (active)
>   ifeffit @1.2.13_0+gcc48 (active)
>   p5.16-ifeffit @2_0 (active)
>
>  $ ls -l /opt/local/bin/athena
> lrwxr-xr-x  1 root  admin  43 Jul 14 10:53 /opt/local/bin/athena ->
> /opt/local/libexec/perl5.16/sitebin/dathena
>
>  $ ls -l /opt/local/bin/atoms
> lrwxr-xr-x  1 root  admin  45 Jul 14 10:53 /opt/local/bin/atoms ->
> /opt/local/libexec/perl5.16/sitebin/atoms-gui
>
>  As for that perl command, make sure you are using Macports perl.
>
>  $ which perl
> /opt/local/bin/perl
>
>
>  -Frank
>
>  On Jul 14, 2014, at 2:47 PM, Jennifer Carter <jwc137 at case.edu> wrote:
>
>  Frank,
>
>  I followed the instructions for updating a current version, but now when
> I type "athena" or "atoms" in the terminal I get the message "command not
> found" am I missing a step?
>
>  running  perl -e 'use Demeter; print $INC{"Demeter.pm"}, $/'
>
>  indicates that nothing was installed.
>
>  Thanks
> Jennifer
> ᐧ
>
>  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> Jennifer L.W. Carter
>
> Assistant Professor
> Department of Materials Science and Engineering
> Case Western Reserve University
>
> *500B White Building*
>
>
>
> *10900 Euclid Ave. Cleveland, OH 44106-4901 phone: (216) 368-4214
> email: jennifer.w.carter at case.edu <jennifer.w.carter at case.edu>*
>
>
> On Mon, Jul 14, 2014 at 1:04 PM, Schima, Frank <frank.schima at nist.gov>
> wrote:
>
>> Mac OS X users,
>>
>>
>>  Thanks to help from Bruce Ravel and Matt Newville, I have updated
>> ifeffit and Demeter-devel in Macports to fix a number of problems reported.
>>
>>  To update from your current version type the following:
>>
>>  sudo port selfupdate
>> sudo port upgrade outdated
>>
>>  To install from scratch after installing Macports [1]:
>>
>>  sudo port selfupdate
>> sudo port install demeter-devel
>>
>>  When done, your should see the following ports installed:
>>
>>  $ port installed ifeffit p5.16-ifeffit demeter-devel
>> The following ports are currently installed:
>>   demeter-devel @0.9.20pre10_0 (active)
>>   ifeffit @1.2.13_0+gcc48 (active)
>>   p5.16-ifeffit @2_0 (active)
>>
>>  Please reply to the list (NOT to me directly) about how this works for
>> you.
>>
>>
>>  Cheers!
>> Frank
>>
>>  [1] <https://www.macports.org/install.php>
>>
>> _______________________________________________
>> Ifeffit mailing list
>> Ifeffit at millenia.cars.aps.anl.gov
>> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
>>
>>
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