[Ifeffit] DAthena crashes when reconstructing data from PCA -- Update
Bruce Ravel
bravel at bnl.gov
Mon Jul 29 14:34:33 CDT 2013
On 07/29/2013 01:35 PM, John Hayes wrote:
> I have noticed that when I changed the order of the data groups the
> calculated eigenvalues change when the first group on the list changes.
> The changes are very small and not significant, but based on my (very
> limited) knowledge of PCA, it would seem that the order of the data
> would not matter.
John,
I agree that order should not matter in terms of the useful output of
a PCA. However, it seems plausible that the order of input vectors
could result in small numerical differences in the eigenvectors. It
even seems plausible that input vectors in a different order could
result in eigenvectors that are rotated by some non-negligible angle.
In truth, I have neither thought about this nor investigated it before.
I'll put it on my to do list, but I suspect that the bottom line is
one of the two things I suggested.
BTW, the specific problem you reported will certainly be fixed in the
next release. I got that working this morning.
B
--
Bruce Ravel ------------------------------------ bravel at bnl.gov
National Institute of Standards and Technology
Synchrotron Science Group at NSLS --- Beamlines U7A, X24A, X23A2
Building 535A
Upton NY, 11973
Homepage: http://xafs.org/BruceRavel
Software: https://github.com/bruceravel
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