[Ifeffit] a question about the white line
Kelly, Shelly D.
SKelly at anl.gov
Tue Dec 14 10:56:58 CST 2004
I just put a background tutorial on my web page. Complete with project
files and a pdf showing screen shots and some instructions. It used
MoO3 which I found to have a particularly tough background. I used a
theory to remove the background and then showed how to reproduced the
"same" chi(k) data without the theory. If anyone wants to play with the
background and add suggestions I will incorporate more info. Here is a
link to the tutorial: www.mesg.anl.gov/skelly.html
Shelly
> -----Original Message-----
> From: Newville, Matthew G.
> Sent: Sunday, December 12, 2004 11:03 PM
> To: XAFS Analysis using Ifeffit
> Cc: John J. Rehr; Joshua Kas
> Subject: RE: [Ifeffit] a question about the white line
>
> Hi John, Josh,
>
> > Certainly if a spline can do a good job of fitting the mu_0, then
the
> current
> > approach is more or less ok. However in systems with strong white
lines
> > mu_0 can be strongly peaked and hence very difficult to fit with a
few
> > spline points. The broadening function lamda(E) can be constrained
to be
> small.
> > Also, for cases with large whitelines, the location of e0 is
difficult
> to
> > fit - the true e0 can lie well below the edge jump.
>
> Oh, maybe I misunderstood. Is lambda(E) in
> > mu_0 = mu^thy_0(E,E_0,Gamma)[1 + lambda(E)]
>
> just a broadening term or a highly adjustable spline?? I guess
> the whole question is how much freedom this function has.
>
> It definitely sounds interesting to use a theoretical mu_0,
> especially for challenging white lines, but it's not clear how to
> best make this accessible to users. I'll probably have to think
> about this some more, but it would be nice to know the mechanics
> of how you're doing it, and how well you need to know the
> structure before you start.
>
> > In our view, mu0 does not depend very much on structure, since
it's
> > mostly determined by the local embedded atom potential. For this
reason
> > it's calculation would also be quite fast (only phase shifts and the
> > cross-section are needed) compared to a calculation of chi(k) which
> > requires multiple scattering paths.
>
> Well, usually a standard for autobk only needs a decent guess of
> the first shell. Getting a standard does require some prior
> knowledge of the system and calculation time, but I don't know
> that it would be a lot more knowledge and time than would be
> needed for a mu^thy_0(E). Anyway, it would still be interesting
> to compare these two (autobk using calculated chi(k) v. starting
> with a mu^thy_0 and massaging it to match data).
>
> On the other hand, it sounds as if the mu^thy_0(E) for a few dozen
> (or few hundreds) challenging systems could be tabulated. That
> would make it very fast and very simple to use!
>
> --Matt
>
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