# Tell p2util which serial port to use to communicate with the imager adapter board 
set --imagerport /dev/ttyS2
# Specify from where p2util can load pipeline code and to where output data may be placed
set --srcdir /home/bruker/config
set --dstdir /data/darks
set --fpga ProcessImageFPGA_top_b00001_L150C4_160601.mbf 
# Connect to Matrox Radient board
connect --system
connect --detector
# Enable dr summation and set the threshold below which dr summation is used at 1.0 second
set --dr-summation 1
set --dr-summation-threshold 1.0
# Load coefficient, flood, and adc0 files
set --srcdir /home/bruker/A109905
load --filename coefficients_hfw_A109905.raw --coefficients
load --filename flood_A109905.bin --flood
load --filename bad_pixels --bad-pixel
set --srcdir /data/darks
load --filename average_adc0_001500.raw --adc0
# Load averaged dark frame files
reset --all-fpga-darks
set --dark-exposure-times 0.05,3.0,6.0,9.0,13.0,16.0,19.0,22.0,25.0,28.0,32.0,35.0,38.0,41.0,44.0,47.0,51.0,54.0,57.0,60.0
load --filename average_hfw_000050.raw --fpga-index 0
load --filename average_hfw_003000.raw --fpga-index 1
load --filename average_hfw_006000.raw --fpga-index 2
load --filename average_hfw_009000.raw --fpga-index 3
load --filename average_hfw_013000.raw --fpga-index 4
load --filename average_hfw_016000.raw --fpga-index 5
load --filename average_hfw_019000.raw --fpga-index 6
load --filename average_hfw_022000.raw --fpga-index 7
load --filename average_hfw_025000.raw --fpga-index 8
load --filename average_hfw_028000.raw --fpga-index 9
load --filename average_hfw_032000.raw --fpga-index 10
load --filename average_hfw_035000.raw --fpga-index 11
load --filename average_hfw_038000.raw --fpga-index 12
load --filename average_hfw_041000.raw --fpga-index 13
load --filename average_hfw_044000.raw --fpga-index 14
load --filename average_hfw_047000.raw --fpga-index 15
load --filename average_hfw_051000.raw --fpga-index 16
load --filename average_hfw_054000.raw --fpga-index 17
load --filename average_hfw_057000.raw --fpga-index 18
load --filename average_hfw_060000.raw --fpga-index 19
# configure p2util to collect data frames that will be written to "/data".
set --acquisition-mode-auto
set --frame-trigger-mode continuous
set --frame-trigger-source internal
set --subsubframe-trigger external
set --subsubframe-trigger-source timer
set --dac0 61000 --dac2 64000 --dac3 61000 --dac5 64000
set --hfw 1 adu-offset 64
set --subframes-per-frame 10 --subsubframes-per-subframe 7
reset --save-sub-sub-frames --save-sub-frames
set --save-frames
set --linearize
set --average
set --dark
set --flood
set --image-flip true
set --runnumber 1
set --exposure-time 0.5
set --dstdir /data